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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41201271_41201675_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41201271 - 41201675

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTATCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CTACCTTTATCT

Flanking Amino Acid:

GGKINSDIWKDLHAATVNPD

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.3

1.16

0.7

93.2

21.3

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

77.9

0.63

0.8

70.1

35.4

Minor 5ss

-2.4

3.8

41.8

44.8

Minor BPS

59.9

0.39

1.6

74.06

42.8

Associated Gene:

Gene:

APBB2

Ensembl Gene ID:

ENSAPLG00000006759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040608

41121623 - 41293764

172142

ENSAPLT00000032205

41147407 - 41293764

146358

ENSAPLT00000007023

41147407 - 41249883

102477