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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41201739_41205702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41201739 - 41205702

Intron Length:

3964

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACACAC

5'SS Class:

major

3'SS Sequence:

ATTATGTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

GTGTGAATAATT

Flanking Amino Acid:

ITPSPTPETEKQPWSDFAVL

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.2

40.1

Major BPS

0.72

80.3

31.7

Major PPT

0.38

1.1

58.7

46.6

Minor 5ss

37.8

-1.4

3.1

50.8

45.8

Minor BPS

45.6

-0.2

2.2

66.86

43.8

Associated Gene:

Gene:

APBB2

Ensembl Gene ID:

ENSAPLG00000006759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040608

41121623 - 41293764

172142

ENSAPLT00000032205

41147407 - 41293764

146358

ENSAPLT00000007023

41147407 - 41249883

102477