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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41231082_41231697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41231082 - 41231697

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCGAG

5'SS Class:

major

3'SS Sequence:

TTTTTTTATGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GGTCATTTAACT

Flanking Amino Acid:

SASPSSPDETAAPCSNSEAE

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.2

43.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.8

0.94

0.7

89.1

26.6

Minor 5ss

34.3

-1.8

3.6

45.4

49.7

Minor BPS

63.5

0.5

1.5

76.47

39.4

Associated Gene:

Gene:

APBB2

Ensembl Gene ID:

ENSAPLG00000006759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045671

41230696 - 41258563

27868