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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41232499_41236139_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41232499 - 41236139

Intron Length:

3641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGATGC

5'SS Class:

major

3'SS Sequence:

TTTACTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TCTTTTTTTACT

Flanking Amino Acid:

MSEVLQVDSGVDALAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.3

66.9

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

86.7

0.83

0.7

81.2

30.6

Minor 5ss

33.7

-1.9

2.9

42.8

44.2

Minor BPS

67.9

0.64

1.6

82.93

38.6

Associated Gene:

Gene:

APBB2

Ensembl Gene ID:

ENSAPLG00000006759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045671

41230696 - 41258563

27868

ENSAPLT00000043340

41229576 - 41258563

28988

ENSAPLT00000007023

41147407 - 41249883

102477