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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41236209_41247072_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

41236209 - 41247072

Intron Length:

10864

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTACGTATG

5'SS Class:

major

3'SS Sequence:

TCCCTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGGTTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

65.8

45.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.7

0.8

0.7

83.6

24.5

Minor 5ss

40.3

-1.1

3.1

51.5

45.1

Minor BPS

67.5

0.63

1.3

78.42

39.1

Associated Gene:

Gene:

APBB2

Ensembl Gene ID:

ENSAPLG00000006759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007023

41147407 - 41249883

102477

ENSAPLT00000045671

41230696 - 41258563

27868

ENSAPLT00000043340

41229576 - 41258563

28988