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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41258564_41293627_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

41258564 - 41293627

Intron Length:

35064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAA

U12 Branch Point Sequence:

AGAGCCCTAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

34.4

Major BPS

61.8

0.29

1.1

69.7

35.6

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

-0.9

2.8

53.8

43.6

Minor BPS

50.9

0.03

1.8

60.38

39.4

Associated Gene:

Gene:

APBB2

Ensembl Gene ID:

ENSAPLG00000006759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040608

41121623 - 41293764

172142

ENSAPLT00000034018

41147407 - 41293764

146358

ENSAPLT00000032205

41147407 - 41293764

146358