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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41320497_41321500_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41320497 - 41321500

Intron Length:

1004

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TACGTGTTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

AATGTTTGAAAT

Flanking Amino Acid:

LLLLFPLTEQHENFRKQQTE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

67.1

44.6

Major BPS

0.45

57.8

Major PPT

75.5

0.57

68.1

42.1

Minor 5ss

30.7

-2.2

3.4

40.1

Minor BPS

1.6

65.24

39.1

Associated Gene:

Gene:

UCHL1

Ensembl Gene ID:

ENSAPLG00000007078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007393

41320036 - 41324708

4673

ENSAPLT00000047028

41320036 - 41324708

4673