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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41321652_41322923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41321652 - 41322923

Intron Length:

1272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTATCTTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATAAA

U12 Branch Point Sequence:

CTATGCTGAATA

Flanking Amino Acid:

VANNKDKVKLDEGSALKKFL

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

53.1

0.08

1.2

56.3

37.2

Major PPT

77.1

0.61

0.9

72.6

37.3

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

52.9

0.09

1.9

64.87

41.8

Associated Gene:

Gene:

UCHL1

Ensembl Gene ID:

ENSAPLG00000007078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007393

41320036 - 41324708

4673