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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41323579_41323943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41323579 - 41323943

Intron Length:

365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGTCC

5'SS Class:

major

3'SS Sequence:

CTTTCTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTGAT

U12 Branch Point Sequence:

CTTTCTTTCACA

Flanking Amino Acid:

ANVDGHLYELDGRMPFPVNH

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

67.5

Major BPS

55.7

0.14

1.4

49.1

46.3

Major PPT

87.5

0.84

0.7

25.4

Minor 5ss

37.6

-1.4

3.2

43.1

44.2

Minor BPS

69.1

0.59

1.7

78.6

38.6

Associated Gene:

Gene:

UCHL1

Ensembl Gene ID:

ENSAPLG00000007078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047028

41320036 - 41324708

4673

ENSAPLT00000007393

41320036 - 41324708

4673