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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41339837_41342035_F

Intron Information:

Intron Rank:

131028

Intron Class:

major

Intron Phase:

Intron Coordinates:

41339837 - 41342035

Intron Length:

2199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

TCCTTTGGAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

72.1

31.2

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

67.8

0.4

1.1

64.6

40.3

Minor 5ss

26.3

-2.7

3.1

33.4

Minor BPS

46.5

-0.2

2.1

58.67

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017400

41326577 - 41342131

15555