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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41463822_41469541_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41463822 - 41469541

Intron Length:

5720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTGTATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

CTCTCTTTACTT

Flanking Amino Acid:

ATSPLGDRPFSKMQACEDNG

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

0.6

65.6

41.1

Major PPT

71.1

0.48

69.8

40.3

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

62.1

0.46

1.6

74.65

43.4

Associated Gene:

Gene:

LIMCH1

Ensembl Gene ID:

ENSAPLG00000007483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034491

41347255 - 41516480

169226