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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41463822_41476531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41463822 - 41476531

Intron Length:

12710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TTTACCAACACT

Flanking Amino Acid:

ATSPLGDRPFRFGPRTAVSD

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

82.2

0.8

0.9

81.6

Major PPT

79.3

0.66

0.9

73.9

36.8

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

47.8

-0

2.4

77.66

44.4

Associated Gene:

Gene:

LIMCH1

Ensembl Gene ID:

ENSAPLG00000007483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037711

41347255 - 41516480

169226

ENSAPLT00000007801

41404460 - 41516480

112021