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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41500076_41501292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41500076 - 41501292

Intron Length:

1217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CCGTCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTGT

U12 Branch Point Sequence:

TGTTTCTTGTTT

Flanking Amino Acid:

QVTLQNSDRQELPRGAAVPL

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

36.2

-0.8

4.3

65.7

43.2

Major PPT

72.9

0.51

0.8

65.7

30.3

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

46.8

-0.1

3.4

78.89

37.8

Associated Gene:

Gene:

LIMCH1

Ensembl Gene ID:

ENSAPLG00000007483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037711

41347255 - 41516480

169226

ENSAPLT00000038813

41347255 - 41516480

169226