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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41501368_41502074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41501368 - 41502074

Intron Length:

707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTAAGTTTAATT

Flanking Amino Acid:

WRRSRFFSQPADSDSGDKSN

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

91.7

0.94

0.5

88.6

21.1

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

60.3

0.4

1.8

77.21

39.7

Associated Gene:

Gene:

LIMCH1

Ensembl Gene ID:

ENSAPLG00000007483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038813

41347255 - 41516480

169226

ENSAPLT00000037711

41347255 - 41516480

169226