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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41502812_41504522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41502812 - 41504522

Intron Length:

1711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TATCCTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

ATGCTCTGAATT

Flanking Amino Acid:

WQHEQERLLQEKYQKEQDKL

Intron Amino Acid Position:

780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

80.1

0.68

0.8

73.3

31.3

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

59.6

0.38

1.4

72.44

38.5

Associated Gene:

Gene:

LIMCH1

Ensembl Gene ID:

ENSAPLG00000007483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034491

41347255 - 41516480

169226

ENSAPLT00000039937

41347255 - 41516480

169226

ENSAPLT00000028057

41425097 - 41516480

91384

ENSAPLT00000038813

41347255 - 41516480

169226

ENSAPLT00000037711

41347255 - 41516480

169226

ENSAPLT00000022003

41347255 - 41516480

169226

ENSAPLT00000037141

41347255 - 41516480

169226

ENSAPLT00000048073

41347255 - 41516480

169226

ENSAPLT00000007801

41404460 - 41516480

112021