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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41507570_41509227_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41507570 - 41509227

Intron Length:

1658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGAGTC

5'SS Class:

major

3'SS Sequence:

CCTCCCATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAG

U12 Branch Point Sequence:

TTTGTCCTAAGT

Flanking Amino Acid:

PARLNLPLTQDVSWNQQLLT

Intron Amino Acid Position:

932

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

69.4

35.7

Major BPS

64.6

0.36

1.5

63.4

44.3

Major PPT

77.2

0.61

0.8

73.4

29.9

Minor 5ss

29.1

-2.4

3.4

33.4

Minor BPS

54.7

0.22

2.1

79.84

42.4

Associated Gene:

Gene:

LIMCH1

Ensembl Gene ID:

ENSAPLG00000007483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022003

41347255 - 41516480

169226

ENSAPLT00000037711

41347255 - 41516480

169226

ENSAPLT00000007801

41404460 - 41516480

112021

ENSAPLT00000037141

41347255 - 41516480

169226

ENSAPLT00000048073

41347255 - 41516480

169226

ENSAPLT00000034491

41347255 - 41516480

169226

ENSAPLT00000039937

41347255 - 41516480

169226

ENSAPLT00000028057

41425097 - 41516480

91384

ENSAPLT00000038813

41347255 - 41516480

169226