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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41510443_41512832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41510443 - 41512832

Intron Length:

2390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAAAAG

5'SS Class:

major

3'SS Sequence:

GTTTGTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTTCTTACAA

Flanking Amino Acid:

SPAAPSQSPNRSVSGKKLCS

Intron Amino Acid Position:

1092

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

65.1

40.7

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

74.1

0.54

0.9

66.1

40.8

Minor 5ss

31.1

-2.2

3.2

39.5

Minor BPS

67.5

0.54

1.7

80.08

35.8

Associated Gene:

Gene:

LIMCH1

Ensembl Gene ID:

ENSAPLG00000007483

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037141

41347255 - 41516480

169226

ENSAPLT00000048073

41347255 - 41516480

169226

ENSAPLT00000034491

41347255 - 41516480

169226

ENSAPLT00000039937

41347255 - 41516480

169226

ENSAPLT00000028057

41425097 - 41516480

91384

ENSAPLT00000038813

41347255 - 41516480

169226

ENSAPLT00000022003

41347255 - 41516480

169226

ENSAPLT00000037711

41347255 - 41516480

169226