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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41533469_41535460_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41533469 - 41535460

Intron Length:

1992

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCACCGAGG

5'SS Class:

weak_major

3'SS Sequence:

CGCTTATTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTTAT

U12 Branch Point Sequence:

TATAGCTCACCC

Flanking Amino Acid:

GTDGHRALRRGVVWEVLGRG

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.4

51.3

45.3

Major BPS

63.9

0.35

1.2

42.7

Major PPT

70.2

0.45

69.1

40.9

Minor 5ss

25.4

-2.8

4.1

30.7

42.8

Minor BPS

45.4

-0.3

2.2

60.7

44.1

Associated Gene:

Gene:

PHOX2B

Ensembl Gene ID:

ENSAPLG00000007835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008123

41533259 - 41536847

3589