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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41552041_41552711_F

Intron Information:

Intron Rank:

139762

Intron Class:

major

Intron Phase:

Intron Coordinates:

41552041 - 41552711

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTAAG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TTTACTTAGAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

79.8

35.1

Major BPS

82.2

0.8

71.9

35.8

Major PPT

79.5

0.66

0.8

76.1

32.4

Minor 5ss

35.1

-1.7

2.7

42.1

44.6

Minor BPS

0.17

1.9

76.76

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043151

41551639 - 41553338

1700

ENSAPLT00000040692

41545879 - 41553338

7460