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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4158175_4159989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4158175 - 4159989

Intron Length:

1815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTAATTGAATT

Flanking Amino Acid:

QNTVKFKYPRSNQFKEILSY

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

100

1.12

0.4

100

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

58.2

0.34

1.6

78.72

37.3

Associated Gene:

Gene:

GSTCD

Ensembl Gene ID:

ENSAPLG00000016467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040239

4104569 - 4166573

62005