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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4160021_4164119_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4160021 - 4164119

Intron Length:

4099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGAAAT

U12 Branch Point Sequence:

TGCTACTGGACC

Flanking Amino Acid:

NQFKEILSYKEHMILCRFAD

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

79.7

35.4

Major BPS

46.7

-0.2

1.3

41.5

Major PPT

91.8

0.94

0.6

84.6

30.3

Minor 5ss

41.2

-1

2.5

50.1

46.4

Minor BPS

52.9

0.07

1.7

64.61

40.8

Associated Gene:

Gene:

GSTCD

Ensembl Gene ID:

ENSAPLG00000016467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040239

4104569 - 4166573

62005