Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_41607571_41608597_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41607571 - 41608597

Intron Length:

1027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTAATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTCTTTATCA

Flanking Amino Acid:

MQGGAGGGAVQFLMANKLDT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

68.8

42.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.56

0.9

33.5

Minor 5ss

39.9

-1.1

2.9

41.5

Minor BPS

77.7

0.86

1.5

87.09

31.4

Associated Gene:

Gene:

TMEM33

Ensembl Gene ID:

ENSAPLG00000007860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026373

41607514 - 41613709

6196

ENSAPLT00000008161

41607506 - 41615020

7515