Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_41608693_41609113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41608693 - 41609113

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGATGATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTCCTCTGATG

Flanking Amino Acid:

CSALFVLPLLGLHEAASFYQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

77.1

37.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

73.6

0.53

66.2

44.1

Minor 5ss

-0.6

2.5

52.7

Minor BPS

48.7

-0.2

1.7

56.27

39.7

Associated Gene:

Gene:

TMEM33

Ensembl Gene ID:

ENSAPLG00000007860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026373

41607514 - 41613709

6196

ENSAPLT00000008161

41607506 - 41615020

7515