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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41642566_41645847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41642566 - 41645847

Intron Length:

3282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTTTTTCAACT

Flanking Amino Acid:

IHSLADTCNQALLALGISQS

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.7

0.56

0.9

70.6

35.1

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

0.74

1.4

86.14

33.5

Associated Gene:

Gene:

SLC30A9

Ensembl Gene ID:

ENSAPLG00000007998

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008340

41627255 - 41658918

31664