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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41741784_41747176_R

Intron Information:

Intron Rank:

137504

Intron Class:

major

Intron Phase:

Intron Coordinates:

41741784 - 41747176

Intron Length:

5393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGGCTTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTCGAT

U12 Branch Point Sequence:

GCTCACTCGATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

52.4

0.06

1.3

52.1

43.1

Major PPT

78.8

0.65

0.9

73.2

37.2

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

44.4

-0.5

1.8

46.12

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021452

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019235

41741483 - 41748994

7512