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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41778177_41782478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41778177 - 41782478

Intron Length:

4302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTAAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

YLLLGNTVYTFVVLTVCLKA

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

87.3

0.84

0.9

89.9

23.6

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

ATP8A1

Ensembl Gene ID:

ENSAPLG00000008428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008812

41761209 - 41837937

76729