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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41788865_41789004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41788865 - 41789004

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATC

Flanking Amino Acid:

ERWCIGLYNVMFTAMPPLTL

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

75.7

29.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.9

0.49

0.9

63.1

42.4

Minor 5ss

37.4

-1.4

44.1

44.7

Minor BPS

77.2

0.83

79.83

28.4

Associated Gene:

Gene:

ATP8A1

Ensembl Gene ID:

ENSAPLG00000008428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008812

41761209 - 41837937

76729