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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41799326_41804218_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41799326 - 41804218

Intron Length:

4893

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTTTGTGCAATA

Flanking Amino Acid:

LIVINEGSLDGTRETLSHHC

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

83.2

30.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

70.4

0.46

66.6

39.5

Minor 5ss

36.4

-1.5

2.7

41.6

38.3

Minor BPS

45.4

-0.3

2.4

66.76

40.7

Associated Gene:

Gene:

ATP8A1

Ensembl Gene ID:

ENSAPLG00000008428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024195

41799149 - 41839554

40406

ENSAPLT00000008812

41761209 - 41837937

76729