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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41806792_41822392_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41806792 - 41822392

Intron Length:

15601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTTACCTGA

5'SS Class:

weak_major

3'SS Sequence:

CTTTAGGCTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTCTCTTTAGGC

Flanking Amino Acid:

LKNCMYTHPKITLCFAVAEI

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.4

42.6

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

62.4

0.28

1.1

64.2

41.6

Minor 5ss

47.5

-0.2

2.6

61.5

43.4

Minor BPS

57.4

0.21

1.9

69.6

42.5

Associated Gene:

Gene:

ATP8A1

Ensembl Gene ID:

ENSAPLG00000008428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008812

41761209 - 41837937

76729