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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41825270_41828599_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41825270 - 41828599

Intron Length:

3330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAAAAA

5'SS Class:

major

3'SS Sequence:

ATCATTCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTATCATTCATT

Flanking Amino Acid:

TSNLNEELGQVKYIFSDKTG

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

70.2

35.7

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

69.4

0.44

0.9

67.2

38.8

Minor 5ss

30.7

-2.2

3.2

39.2

46.2

Minor BPS

59.7

0.39

82.08

39.4

Associated Gene:

Gene:

ATP8A1

Ensembl Gene ID:

ENSAPLG00000008428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024195

41799149 - 41839554

40406

ENSAPLT00000008812

41761209 - 41837937

76729