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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41828678_41830009_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41828678 - 41830009

Intron Length:

1332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

ATATATATACTT

Flanking Amino Acid:

KFIQAYFINWDIDMHYEPTD

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

84.2

33.9

Major BPS

85.7

0.89

0.8

22.2

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

40.6

-1.1

51.6

45.1

Minor BPS

45.4

-0.2

1.9

65.02

39.6

Associated Gene:

Gene:

ATP8A1

Ensembl Gene ID:

ENSAPLG00000008428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024195

41799149 - 41839554

40406

ENSAPLT00000008812

41761209 - 41837937

76729