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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41832939_41836929_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41832939 - 41836929

Intron Length:

3991

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TGATGCTAAAAT

Flanking Amino Acid:

FVGNIRLDGHGTVPLGSDQI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.9

35.2

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

80.6

0.69

0.8

73.3

37.2

Minor 5ss

40.7

-1

2.5

42.1

44.8

Minor BPS

0.01

2.2

70.97

45.3

Associated Gene:

Gene:

ATP8A1

Ensembl Gene ID:

ENSAPLG00000008428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024195

41799149 - 41839554

40406

ENSAPLT00000008812

41761209 - 41837937

76729