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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41837757_41837924_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41837757 - 41837924

Intron Length:

168

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAAACTTT

5'SS Class:

major

3'SS Sequence:

ATATAAATTTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TATAATATAAAT

Flanking Amino Acid:

MITFGFFSLNSEPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

66.4

44.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

58.1

0.18

1.2

59.1

44.5

Minor 5ss

-1.2

4.3

60.9

46.1

Minor BPS

47.8

-0

1.9

69.75

40.2

Associated Gene:

Gene:

ATP8A1

Ensembl Gene ID:

ENSAPLG00000008428

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008812

41761209 - 41837937

76729