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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4186230_4187201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4186230 - 4187201

Intron Length:

972

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGCC

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTCGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAAAT

Flanking Amino Acid:

SLGAAGEFDRRWPRQIVSST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

69.2

36.8

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

72.9

0.52

70.2

40.7

Minor 5ss

30.3

-2.3

3.5

Minor BPS

67.7

0.64

1.5

85.71

33.9

Associated Gene:

Gene:

NPNT

Ensembl Gene ID:

ENSAPLG00000004656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021324

4186159 - 4233456

47298

ENSAPLT00000004808

4186159 - 4233456

47298