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Intron Name: Anas_platyrhynchos_platyrhynchos_4_41950819_41953293_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41950819 - 41953293

Intron Length:

2475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TCTTTCTTACTT

Flanking Amino Acid:

ELQDLLTKIERVQHPHECLS

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

90.9

28.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

75.3

0.57

72.6

36.4

Minor 5ss

47.2

-0.3

2.7

68.8

41.8

Minor BPS

69.1

0.68

1.6

82.74

39.5

Associated Gene:

Gene:

GRXCR1

Ensembl Gene ID:

ENSAPLG00000009269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009638

41916730 - 41953473

36744