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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4195114_4202326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4195114 - 4202326

Intron Length:

7213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCTGA

5'SS Class:

major

3'SS Sequence:

CTTCTGTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

GGAAGAGTAATG

Flanking Amino Acid:

RIASLRCQPKAICQPGCKHG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.2

67.1

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

85.4

0.8

79.9

32.1

Minor 5ss

39.6

-1.2

2.8

48.4

47.2

Minor BPS

-1.2

2.3

35.78

39.1

Associated Gene:

Gene:

NPNT

Ensembl Gene ID:

ENSAPLG00000004656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021324

4186159 - 4233456

47298