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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4209772_4210426_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4209772 - 4210426

Intron Length:

655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTACGGCAA

5'SS Class:

weak_major

3'SS Sequence:

TATTTTCCCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

GATTCCTTATCT

Flanking Amino Acid:

YMLMPDGTCSNALSCSMANC

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.7

0.23

1.1

41.7

Major BPS

78.8

0.72

67.9

40.1

Major PPT

77.6

0.62

0.8

70.8

35.8

Minor 5ss

31.2

-2.2

3.5

43.2

45.2

Minor BPS

74.6

0.85

1.6

86.42

Associated Gene:

Gene:

NPNT

Ensembl Gene ID:

ENSAPLG00000004656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021324

4186159 - 4233456

47298

ENSAPLT00000004808

4186159 - 4233456

47298