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Intron Name: Anas_platyrhynchos_platyrhynchos_4_421404_433424_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

421404 - 433424

Intron Length:

12021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGGGTTGG

5'SS Class:

major

3'SS Sequence:

TTTTTCTCACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

CTTTCGTTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

59.5

42.3

Major BPS

80.4

0.76

80.3

31.8

Major PPT

84.3

0.77

0.8

78.9

34.4

Minor 5ss

34.5

-1.8

3.1

39.4

40.8

Minor BPS

66.6

0.5

2.1

77.77

38.8

Associated Gene:

Gene:

ALPK1

Ensembl Gene ID:

ENSAPLG00000013490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038111

420710 - 460307

39598

ENSAPLT00000014057

421131 - 460307

39177