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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4215105_4216117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4215105 - 4216117

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATAACG

5'SS Class:

major

3'SS Sequence:

CTTTCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

TTTTTTGTAACT

Flanking Amino Acid:

MYIGGKYQCHDIDECSLGQH

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

63.6

40.4

Major BPS

0.45

57.8

Major PPT

85.3

0.79

0.8

80.2

31.8

Minor 5ss

-1.8

2.9

39.1

39.9

Minor BPS

69.1

0.68

90.89

33.1

Associated Gene:

Gene:

NPNT

Ensembl Gene ID:

ENSAPLG00000004656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021324

4186159 - 4233456

47298

ENSAPLT00000004808

4186159 - 4233456

47298