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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4226952_4230009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4226952 - 4230009

Intron Length:

3058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTTACTGAAGT

Flanking Amino Acid:

LHWEPIRDASGGQYLTISEA

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

69.9

41.1

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

91.7

0.94

0.6

87.8

22.3

Minor 5ss

32.3

-2

3.1

42.6

44.3

Minor BPS

0.49

86.18

39.4

Associated Gene:

Gene:

NPNT

Ensembl Gene ID:

ENSAPLG00000004656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021324

4186159 - 4233456

47298

ENSAPLT00000004808

4186159 - 4233456

47298