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Intron Name: Anas_platyrhynchos_platyrhynchos_4_4230267_4233360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4230267 - 4233360

Intron Length:

3094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCCAAT

U12 Branch Point Sequence:

CGTTCTTGCACT

Flanking Amino Acid:

ITLRGPGTKSVIFRGEKGKG

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

69.7

36.3

Major BPS

59.5

0.24

1.3

68.4

35.9

Major PPT

90.1

0.9

0.6

84.1

30.8

Minor 5ss

32.6

-2

2.7

35.6

40.5

Minor BPS

0.18

73.22

43.7

Associated Gene:

Gene:

NPNT

Ensembl Gene ID:

ENSAPLG00000004656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004808

4186159 - 4233456

47298

ENSAPLT00000021324

4186159 - 4233456

47298