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Intron Name: Anas_platyrhynchos_platyrhynchos_4_42407672_42409344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42407672 - 42409344

Intron Length:

1673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ACTTGCTTATAT

Flanking Amino Acid:

AMSQSESKYRAGKVHFGYVY

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.9

41.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

85.3

0.79

0.8

77.6

40.8

Minor 5ss

33.6

-1.9

3.5

39.1

46.1

Minor BPS

49.8

0.07

2.1

71.39

45.3

Associated Gene:

Gene:

YIPF7

Ensembl Gene ID:

ENSAPLG00000009441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009853

42402840 - 42415061

12222