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Intron Name: Anas_platyrhynchos_platyrhynchos_4_42407672_42412020_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42407672 - 42412020

Intron Length:

4349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGATGT

5'SS Class:

major

3'SS Sequence:

ATATTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ACTTGCTTATAT

Flanking Amino Acid:

CLALGATLLLAGKVHFGYVY

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

65.2

41.6

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

85.3

0.79

0.8

77.6

40.8

Minor 5ss

38.4

-1.3

3.4

52.9

46.1

Minor BPS

49.8

0.07

2.1

71.39

45.3

Associated Gene:

Gene:

YIPF7

Ensembl Gene ID:

ENSAPLG00000009441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039837

42402751 - 42417344

14594