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Intron Name: Anas_platyrhynchos_platyrhynchos_4_42412167_42413912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42412167 - 42413912

Intron Length:

1746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

AAGCAATTAAAT

Flanking Amino Acid:

GFDEEPPLLEELGINFEHIW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.83

0.7

81.8

28.4

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

46.5

-0.1

1.8

61.46

Associated Gene:

Gene:

YIPF7

Ensembl Gene ID:

ENSAPLG00000009441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039837

42402751 - 42417344

14594

ENSAPLT00000009853

42402840 - 42415061

12222