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Intron Name: Anas_platyrhynchos_platyrhynchos_4_42458657_42462212_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42458657 - 42462212

Intron Length:

3556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

CAATTGTAAAGC

Flanking Amino Acid:

LRVKTVKYFKGLMHVHNKLV

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.5

33.9

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

66.9

0.38

64.6

31.3

Minor 5ss

36.6

-1.5

2.9

49.5

46.5

Minor BPS

39.8

-0.7

2.4

47.05

42.6

Associated Gene:

Gene:

GNPDA2

Ensembl Gene ID:

ENSAPLG00000009862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042857

42457984 - 42465852

7869