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Intron Name: Anas_platyrhynchos_platyrhynchos_4_42462388_42462480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42462388 - 42462480

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GAGGACTGAAAG

Flanking Amino Acid:

GVGTVMDAREVMILITGAHK

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

87.4

26.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

88.9

0.88

0.7

Minor 5ss

41.1

-1

3.2

58.9

39.4

Minor BPS

42.4

-0.7

1.8

40.96

42.3

Associated Gene:

Gene:

GNPDA2

Ensembl Gene ID:

ENSAPLG00000009862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041526

42459078 - 42465852

6775

ENSAPLT00000030933

42452699 - 42465852

13154

ENSAPLT00000010272

42449473 - 42465852

16380

ENSAPLT00000042857

42457984 - 42465852

7869