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Intron Name: Anas_platyrhynchos_platyrhynchos_4_42463189_42463696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42463189 - 42463696

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TAAATGATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AATACATTAATT

Flanking Amino Acid:

VKTFNMDEYVGLPRNHPESY

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

68.2

0.41

1.1

63.2

46.5

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

64.4

0.53

1.6

78.17

37.5

Associated Gene:

Gene:

GNPDA2

Ensembl Gene ID:

ENSAPLG00000009862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042857

42457984 - 42465852

7869

ENSAPLT00000041526

42459078 - 42465852

6775

ENSAPLT00000030933

42452699 - 42465852

13154

ENSAPLT00000010272

42449473 - 42465852

16380