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Intron Name: Anas_platyrhynchos_platyrhynchos_4_42887775_42888226_R

Intron Information:

Intron Rank:

151356

Intron Class:

major

Intron Phase:

Intron Coordinates:

42887775 - 42888226

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAATTTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

73.2

39.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

91.3

0.93

0.7

89.8

25.3

Minor 5ss

39.2

-1.2

3.1

52.5

44.7

Minor BPS

59.2

0.37

1.5

71.92

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028981

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047563

42883199 - 42888473

5275

ENSAPLT00000046625

42865623 - 42888473

22851