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Intron Name: Anas_platyrhynchos_platyrhynchos_4_42894322_42894762_R

Intron Information:

Intron Rank:

148580

Intron Class:

major

Intron Phase:

Intron Coordinates:

42894322 - 42894762

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAATCCA

5'SS Class:

major

3'SS Sequence:

CTTCTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

CTTCTTTCTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.2

58.2

40.6

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

88.6

0.87

0.6

83.6

24.8

Minor 5ss

36.8

-1.5

3.1

44.4

Minor BPS

-0.2

1.8

60.15

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027370

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037885

42893588 - 42895135

1548