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Intron Name: Anas_platyrhynchos_platyrhynchos_4_42926517_42929424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42926517 - 42929424

Intron Length:

2908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATT

Flanking Amino Acid:

WSDGRVLYTLRLTINAECYL

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

33.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.7

0.49

72.4

37.4

Minor 5ss

-1.6

3.2

49.9

46.5

Minor BPS

0.96

86.64

33.8

Associated Gene:

Gene:

GABRG1

Ensembl Gene ID:

ENSAPLG00000015591

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020749

42914958 - 42968956

53999

ENSAPLT00000016265

42914958 - 42969695

54738